I spawned in the savannah, near the village. When I flew there, I noticed that all mobs (including the iron golem and the villagers) had the fire resistance effect. As for the buildings, they generated without roofs, doors, windows, and even walls! I took a few screenshots and flew further. A little further away was the second village that generated normally, nothing was missing! And the mobs had no effect at all.
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I looked through my worlds and I think I found one with such a village - unless it's another one... In this world, when spawned, you should type the command: "Locate structure Minecraft:village_savanna". Then teleport there... And there it is! The expected result is to see mobs with the fire resistance effect and buildings without various elements - roofs, floors, doors, etc. The seed for this world is -2142137735
PS: If the result is different, then I suspect the destruction of the buildings is a fire (in my world). As for the effects, I have no idea. Oh, and I'll add a few more screenshots (from today).
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Please provide a copy of the world where you experienced this issue.
Additionally, are you playing with any mods or datapacks that may alter world generation? Please see if you can reliably and consistently reproduce this issue across multiple different worlds and describe to us how to observe the issue ourselves.
I would also double check that you did not run any /effect give commands which may have targeted @e (all entities)
seed?