The brewing stand usually only lets you put one bottle in each potion slot, whether empty or filled. But if you have a stack of empty bottles, and you shift-click that stack into the stand, they all go into the same slot. So:
What I expected to happen: The empty bottles stack, when I shift click them into the brewing stand, should put one empty bottle in each slot.
What happened: The stack of empty bottles, instead of putting one in each slot, all went into one slot. Pictures below.
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This ticket is invalid as it relates to a modded or 3rd party client/server.
Any non-standard client/server build needs to be taken up with the appropriate team, not Mojang.
Any plugin issues need to be addressed to the plugin creator.
This site is for addressing issues related to the base unmodded MineCraft
I'd say it's more of a bug that you can put empty bottles into a brewing stand, since those won't do anything there...