I have a world generated in mc 1.13 and transfered it to 1.13.1 on a server and on the edge of a chunck border a desert well only generated on one chunck not in the other. the images will clarify
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Cannot confirm, the desert well generated normally. I created the world in 1.13 and upgraded it straight to 1.13.1. I did not load the chunk with said desert well until after upgrading.
Please check if that's still an issue for you in the latest 1.14.4 stable release or the latest 1.15 development snapshot.
Can you add a seed and coordinates?