Resource Packs cannot find specific textures "Missing"

Loading up a resource pack returns missing textures for many blocks... included is a list of the blocks affected and a screen shot;

Note: None of the textures are edited in the resource pack.

Affected Blocks:

• Stone

• Grass

  • Affects both side and top textures

• Cobblestone

• Bedrock

• Sand

• Gravel

• All Ore Blocks; (ex. Coal Ore)

• All Ore Storage Blocks (Ex. Coal Block)

  • Strangely Prismarine is unnafected

• Dry or Regular Sponge

  • wet works fine
    *Glass

• Dirt

  • Coarse Dirt is unchanged (looks fine)

  • Podzol also shows up normally

• Bookshelf

• Moss Stone

• Obsidian

• All Stair Blocks

• Both Ice Blocks (packed and normal)

• Snow

• Clay

• Pumpkin

• Netherrack, Soul Sand and Glowstone

• Jack O Lanterns

• Mycelium

• NetherBrick

• Endstone

• Hardended Clay's default state (dyed clays show up fine)

• All Leaf Blocks

• Crafting Table

• Furnace (Both States)

• A Lot More That I Cant list at the moment