[MC-78647] Clouds make water invisible/Clouds render in front of water

When looking at water with clouds below the water, the clouds appear as if they were in front of the water, not behind it.

Linked issues

Matthew Trescott 2015-03-14T02:12:41Z

Notice how the clouds appear to be above the waterfall, though they are actually below it.

Dlawso the Really Lucky Rabbit 2015-03-14T03:50:39Z

Dupe of MC-9553

Matthew Trescott 2015-03-14T13:02:32Z

Another example.

Dlawso the Really Lucky Rabbit 2015-03-14T13:04:04Z

Its already resolved as a duplicate. No need to update it.