I've filled the inside of a building with water , on top of it I've transformed grass blocks into grass path blocs I noticed there is an issue with it and it bothers me, It's not very beautiful to see...
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Duplicate of MC-125351

It's actually its own issue - paths are not really related to waterlogging to be fair,

But MC-125351 does not say that the problems are with waterlogged, bug says that some blocks still show air around them., so, this ticket duplicate

You are correct - that ticket definitely needs some kind of restructuring...