Thanks Tom Schumm, /entitydata @e[type=EnderDragon] {Health:0.0f} worked for me!
And furthermore, shooting arrows at her doesn't cause damage. Haven't tried any other attack means.
Having taken these 1 minute apart you would expect the dragon to have moved. Sorry it's dark, but she's flying just above the pillar.
Thanks Tom Schumm, /entitydata @e[type=EnderDragon] {Health:0.0f} worked for me!